Methods
Harmonization, cadence, and the cost of sampling slowly
Nine national and subnational programs, each with its own schema, units, and indicator vocabulary, reduced to a single comparable record.
Harmonization and quality control
All concentrations were standardized to colony forming units per 100 mL. Most probable number values were treated as colony forming units, an approximation; qPCR-equivalent and nonconvertible units were dropped. Censored values were assigned a direction and filled at half the lower detection limit, or at the upper limit for right-censored values. Source-specific location descriptors were mapped to a controlled vocabulary of water-body types, and the marine and inland enterococci records were unified into a single enterococci class.
Repeated observations were averaged within each source, then deduplicated across sources using a fuzzy key with roughly 1 km coordinate tolerance, so records appearing in several portals are not double-counted. Filtering to a valid indicator, a plausible date and coordinates, and a non-negative bounded value reduced 11,151,268 harmonized records to 11,136,805. Groundwater is a distinct exposure pathway and was the only realm excluded; removing its 26,496 records yields the final analysis set of 11,110,309 surface-water observations.
Sampling cadence
For each site we computed the number of observations, the temporal span, and the median gap between consecutive distinct sampling days. Counting distinct days rather than raw records prevents same-day replicate sampling from inflating apparent frequency. Sites were binned by that median gap into daily, near-daily, weekly, monthly, quarterly, yearly, and longer classes.
The high-frequency analysis applies a stricter test for genuine near-daily monitoring: at least 30 distinct sampling days within a single recent calendar year (2018 or later), with a distinct-day median gap of at most three days, judged on each site's densest year.
Safety thresholds
Recreational safety uses realm-specific single-sample values from the 2012 US EPA recreational water quality criteria: 410 CFU/100 mL for E. coli in fresh water and 130 CFU/100 mL for enterococci in marine water.
Downsampling: what a slower schedule would have missed
To quantify the safety cost of coarse sampling, each near-daily site-year is treated as ground truth. We simulate monitoring programs at intervals from daily to quarterly: to every scheduled date we assign the nearest available observation, post a single-sample advisory that persists until the next scheduled sample, and score that standing advisory against the true daily state on every observed day, averaging false-safe and false-unsafe day rates over all phase offsets of the schedule.
The result is the paper's second blind spot. Slower schedules do not merely lose resolution; they systematically misadvise, and they err toward calling unsafe water safe.